First of hats off to you for such a grtt component. I am having exactly the same problem as stated above by vfx. I also followed exactly the same steps and everything seems to be running fine. What the problem is that.. the URL do not luk good with SEF enabled. I m using Joomla 1.5 built in SEF.
On clicking a section inside the phoca documentation the URL is seen as :http://localhost/
<menu alias>/section/<section ID>-<section alias>
And on clicking any category inside that section..the displayed URL is:http://localhost/
<menu alias>/category/<categoryID>-<category alias>
Similarly clicking any article inside that category the displayed URLis:http://localhost/component/content/article/
<categoryID>-<category alias>/<articleID>-<article alias>
Can these URLs be corrected by Article Item ID parameter of the phoca documentation menu?